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XdomView is a chime-based visualization tool that maps the domain boundaries of the input PDB
chain, obtained from protein structure classification databases (CATH,
SCOP, NCBI,
3DEE
and DALI)
to its tertiary structure. It also runs BLAST2
for the input PDB chain sequence against all protein sequences in the ExInt*
database and maps the intron positions and phases of aligned search
results on the input protein's 3D structure. Xdom is a useful
visualization tool for scientists working on gene and protein evolution
and structural modeling and classification.
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