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Structural Alignment of MHC-Peptide Complexes using Jmol

Click here to view in Chime
Conserved Residues by Peptide Length
  • Human 8-mer Peptides

  • Human 9-mer Peptides

  • Human 10-mer Peptides

  • Human 13-mer Peptides

  • Human 14-mer Peptides

  • Human 15-mer Peptides

  • Human 20-mer Peptides

  • Murine 8-mer Peptides

  • Murine 9-mer Peptides

  • Murine 10-mer Peptides

  • Murine 13-mer Peptides

  • Murine 14-mer Peptides

  • Murine 16-mer Peptides

  • Rat 9-mer Peptides

    • Conserved Residues by MHC Allele
  • A*0201 9-mer Peptides

  • A*0201 10-mer Peptides

  • B*0801 8-mer Peptides

  • B*0801 9-mer Peptides

  • B*2705 9-mer Peptides

  • B*3501 9-mer Peptides

  • B*5301 9-mer Peptides

  • Cw*0401 9-mer Peptides

  • E*0103 9-mer Peptides

  • H2-Db 9-mer Peptides

  • H2-Db 10-mer Peptides

  • H2-Dd 10-mer Peptides

  • H2-Kb 8-mer Peptides

  • H2-Kb 9-mer Peptides

  • H2-Ld 9-mer Peptides

  • DRB1*0101 13-mer Peptides

  • DRB1*0101 15-mer Peptides



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    Click on the links above to visualize the structural alignment based on MHC class and Peptide length.
    Please be patient. It may take several minutes to load the files depending on connection speed and file size.
    To visualize the structural alignment you need Java plug-in. Click here to download.

    Copyright 2004 Department of Biochemistry, National University of Singapore