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Structural Alignment of MHC-Peptide Complexes using Chime

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Conserved Residues by Peptide Length
  • Human 8-mer Peptides

  • Human 9-mer Peptides

  • Human 10-mer Peptides

  • Human 13-mer Peptides

  • Human 14-mer Peptides

  • Human 15-mer Peptides

  • Human 20-mer Peptides

  • Murine 8-mer Peptides

  • Murine 9-mer Peptides

  • Murine 10-mer Peptides

  • Murine 13-mer Peptides

  • Murine 14-mer Peptides

  • Murine 16-mer Peptides

  • Rat 9-mer Peptides

  • Conserved Residues by MHC Allele
  • A*0201 9-mer Peptides

  • A*0201 10-mer Peptides

  • B*0801 8-mer Peptides

  • B*0801 9-mer Peptides

  • B*2705 9-mer Peptides

  • B*3501 9-mer Peptides

  • B*5301 9-mer Peptides

  • Cw*0401 9-mer Peptides

  • E*0103 9-mer Peptides

  • H2-Db 9-mer Peptides

  • H2-Db 10-mer Peptides

  • H2-Dd 10-mer Peptides

  • H2-Kb 8-mer Peptides

  • H2-Kb 9-mer Peptides

  • H2-Ld 9-mer Peptides

  • DRB1*0101 13-mer Peptides

  • DRB1*0101 15-mer Peptides



  • 1A1M.pdb
    1A1O.pdb
    1A9B.pdb
    1A9E.pdb
    1AKJ.pdb
    1AO7.pdb
    1B0G.pdb
    1B0R.pdb
    1BD2.pdb
    1DUZ.pdb
    1E27.pdb
    1EEY.pdb
    1EEZ.pdb
    1EFX.pdb
    1HHG.pdb
    1HHI.pdb
    1HHJ.pdb
    1HHK.pdb
    1HSA.pdb
    1I1F.pdb
    1I1Y.pdb
    1I7R.pdb
    1I7T.pdb
    1I7U.pdb
    1IM3.pdb
    1IM9.pdb
    1JGE.pdb
    1JHT.pdb
    1K5N.pdb
    1KPR.pdb
    1KTL.pdb
    1LP9.pdb
    1M05.pdb
    1M6O.pdb
    1MHE.pdb
    1MI5.pdb
    1N2R.pdb
    1OF2.pdb
    1OGA.pdb
    1OGT.pdb
    1P7Q.pdb
    1QEW.pdb
    1QQD.pdb
    1QR1.pdb
    1QRN.pdb
    1QSE.pdb
    1QSF.pdb
    1S9W.pdb
    1S9X.pdb
    1S9Y.pdb
    1SYS.pdb
    1SYV.pdb
    1TVB.pdb
    1TVH.pdb
    1UXW.pdb
    1W0V.pdb
    1W0W.pdb
    1W72.pdb
    1XR8.pdb
    1XR9.pdb
    1YDP.pdb
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    Click on the links above to visualize the structural alignment based on MHC class and Peptide length.
    To visualize the structural alignment you need Chime plug-in. Click here to download.